Loaded via a namespace (and not attached): stats4 parallel stats graphics grDevices utils datasets LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 Zero Install is a simple tool that can download portable versions of various applications based on specific feeds, featuring management and synchronization capabilities. HTTP download also available at fast speeds. LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 Download Zero Install 2.24.2 or any other file from Software category. However, if I remove two of the samples that have a low overall read count, it works fine.Īm I missing something? Or is there some specific criteria I could use to identify samples/regions that should be excluded? I've also removed any region or sample from my read counts object that contains zero reads on average. Update Previous Article XMedia Recode 3.5.8.8 Run apps without having to. chromosome Y." I modified my GenomicRanges object so that it excludes chrY. Open source Software Like Post Share Report a problem with article Follow NeowinFeed USB Safely Remove 7. But when I try to apply exomecn.mops, I get an error saying that "Some normalization factors are zero! Remove samples or chromosomes for which the average read count is zero, e.g. I can apply getSegmentReadCountsFromBAM just fine. I'm applying cn.mops to ~10 exome sequencing samples.
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